SMTL ID : 2evs.1 (1 other biounit)

Crystal structure of human Glycolipid Transfer Protein complexed with n-hexyl-beta-D-glucoside

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x GLC: alpha-D-glucopyranose(Non-covalent)

GLC.1: 8 residues within 4Å: Chain A: D.48, N.52, K.55, L.92, W.96, Y.207, V.209 Ligands: HEX.2 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.48, A:N.52, A:N.52, A:K.55, A:Y.207 Water bridges: A:K.55

2 x HEX: HEXANE(Non-covalent)

HEX.2: 6 residues within 4Å: Chain A: P.44, D.48, H.140, F.148, V.209 Ligands: GLC.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:D.48, A:F.148, A:V.209 HEX.4: 2 residues within 4Å: Chain A: P.40, T.43 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:P.40

1 x D10: DECANE(Non-covalent)

D10.3: 6 residues within 4Å: Chain A: H.7, L.30, F.33, L.108, I.180, F.183 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.30, A:F.33, A:F.33, A:L.108, A:I.180, A:F.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malinina, L. et al., The liganding of glycolipid transfer protein is controlled by glycolipid acyl structure. Plos Biol. (2006)

Release Date

2006-11-14

Peptides

Glycolipid transfer protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycolipid transfer protein

Related Entries With Identical Sequence