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SMTL ID : 2g4v.1

anomalous substructure of proteinase K

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

2 x CA: CALCIUM ION(Non-covalent)

CA.1:	4 residues within 4Å: Chain A: P.175, V.177, D.200 Ligands: CA.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.175, A:V.177, A:D.200, A:D.200, H₂O.99
CA.2:	8 residues within 4Å: Chain A: A.172, E.174, P.175, V.177, T.179, V.198, D.200 Ligands: CA.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.174, A:V.177, A:T.179, A:D.200

2 x K: POTASSIUM ION(Non-covalent)

K.3:	2 residues within 4Å: Chain A: N.163, Y.195 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:N.163, A:Y.195, H₂O.113
K.4:	2 residues within 4Å: Chain A: K.258, D.260 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:K.258

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.5:

2 residues within 4Å:

Chain A: Y.61, R.64

Ligand excluded by PLIP

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Mueller-Dieckmann, C. et al., On the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths. Acta Crystallogr.,Sect.D (2007)

Release Date

2007-02-20

Peptides

Proteinase K: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Proteinase K

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