- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.04 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
FAD.4: 24 residues within 4Å:- Chain A: T.21, L.23, K.24, A.25, N.49, E.50, S.51, L.53, S.54, R.60, Y.63, W.67, L.70, L.80, N.82, L.94, V.96, Y.109, L.110, G.111
- Chain C: L.23, A.71, K.73, E.105
34 PLIP interactions:5 interactions with chain C, 29 interactions with chain A- Hydrogen bonds: C:A.71, A:N.49, A:E.50, A:S.51, A:S.54, A:Y.63, A:W.67, A:N.82, A:N.82
- Water bridges: C:T.106, C:Y.109, C:Y.109, A:N.49, A:S.54, A:N.55, A:R.60, A:R.60, A:R.60, A:R.60, A:R.60, A:H.113
- Salt bridges: C:K.73, A:R.60, A:R.60
- Hydrophobic interactions: A:T.21, A:A.25, A:E.50, A:E.50, A:W.67, A:L.70, A:V.96
- pi-Stacking: A:W.67, A:W.67, A:W.67
FAD.6: 19 residues within 4Å:- Chain B: T.21, A.25, N.49, E.50, S.51, L.53, S.54, R.60, Y.63, Q.64, W.67, L.70, L.80, N.82, L.94, V.96, Y.109, L.110, G.111
19 PLIP interactions:19 interactions with chain B- Hydrophobic interactions: B:T.21, B:A.25, B:E.50, B:L.70, B:V.96, B:Y.109, B:Y.109
- Hydrogen bonds: B:S.51, B:S.51, B:S.54, B:S.54, B:R.60, B:N.82, B:N.82
- Water bridges: B:Q.64
- Salt bridges: B:R.60
- pi-Stacking: B:W.67, B:W.67, B:W.67
FAD.11: 24 residues within 4Å:- Chain A: L.23, A.71, K.73, E.105
- Chain C: T.21, L.23, K.24, A.25, N.49, E.50, S.51, L.53, S.54, R.60, Y.63, W.67, L.70, L.80, N.82, L.94, V.96, Y.109, L.110, G.111
31 PLIP interactions:27 interactions with chain C, 4 interactions with chain A- Hydrophobic interactions: C:T.21, C:A.25, C:E.50, C:E.50, C:W.67, C:L.70, C:V.96
- Hydrogen bonds: C:N.49, C:E.50, C:S.51, C:S.54, C:W.67, C:N.82, C:N.82, A:A.71
- Water bridges: C:N.49, C:S.54, C:N.55, C:R.60, C:R.60, C:R.60, C:R.60, C:R.60, A:E.105, A:Y.109
- Salt bridges: C:R.60, C:R.60, A:K.73
- pi-Stacking: C:W.67, C:W.67, C:W.67
FAD.13: 19 residues within 4Å:- Chain D: T.21, A.25, N.49, E.50, S.51, L.53, S.54, R.60, Y.63, Q.64, W.67, L.70, L.80, N.82, L.94, V.96, Y.109, L.110, G.111
20 PLIP interactions:20 interactions with chain D- Hydrophobic interactions: D:T.21, D:A.25, D:E.50, D:L.70, D:V.96, D:Y.109, D:Y.109
- Hydrogen bonds: D:S.51, D:S.51, D:S.54, D:S.54, D:R.60, D:Y.63, D:N.82, D:N.82
- Water bridges: D:Q.64
- Salt bridges: D:R.60
- pi-Stacking: D:W.67, D:W.67, D:W.67
- 2 x EOH: ETHANOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Key, J. et al., Structure of the redox sensor domain of Azotobacter vinelandii NifL at atomic resolution: signaling, dimerization, and mechanism. Biochemistry (2007)
- Release Date
- 2007-03-06
- Peptides
- Nitrogen fixation regulatory protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.04 Å
- Oligo State
- homo-tetramer
- Ligands
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 4 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)
- 2 x EOH: ETHANOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Key, J. et al., Structure of the redox sensor domain of Azotobacter vinelandii NifL at atomic resolution: signaling, dimerization, and mechanism. Biochemistry (2007)
- Release Date
- 2007-03-06
- Peptides
- Nitrogen fixation regulatory protein: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B