- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
NAP.2: 28 residues within 4Å:- Chain A: G.28, T.30, G.31, S.32, F.33, S.54, R.55, D.56, K.59, G.77, D.78, V.79, A.98, A.99, A.100, K.102, T.117, L.140, S.141, Y.152, K.156, Y.182, G.183, N.184, V.185, S.188, R.189
- Ligands: GDU.1
28 PLIP interactions:28 interactions with chain A- Hydrophobic interactions: A:Y.182, A:V.185
- Hydrogen bonds: A:T.30, A:T.30, A:S.32, A:S.32, A:F.33, A:R.55, A:R.55, A:D.56, A:D.78, A:V.79, A:A.98, A:A.100, A:K.156, A:V.185, A:S.188, A:S.188
- Water bridges: A:G.31, A:G.34, A:R.80, A:T.142
- Salt bridges: A:R.55, A:K.59, A:K.102, A:K.102, A:R.189
- pi-Cation interactions: A:R.55
NAP.5: 26 residues within 4Å:- Chain B: G.28, T.30, G.31, S.32, F.33, S.54, R.55, D.56, K.59, G.77, D.78, V.79, A.98, A.99, A.100, K.102, T.117, L.140, S.141, Y.152, K.156, Y.182, G.183, V.185, S.188, R.189
34 PLIP interactions:34 interactions with chain B- Hydrophobic interactions: B:Y.182, B:V.185
- Hydrogen bonds: B:T.30, B:T.30, B:S.32, B:S.32, B:F.33, B:R.55, B:D.56, B:D.78, B:V.79, B:A.98, B:A.100, B:Y.152, B:K.156, B:V.185, B:S.188, B:S.188
- Water bridges: B:G.31, B:S.32, B:S.32, B:G.34, B:K.59, B:K.59, B:R.80, B:A.100, B:R.189, B:R.189
- Salt bridges: B:R.55, B:K.59, B:K.102, B:K.102, B:R.189
- pi-Cation interactions: B:R.55
- 1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ishiyama, N. et al., Structural Studies of FlaA1 from Helicobacter pylori Reveal the Mechanism for Inverting 4,6-Dehydratase Activity. J.Biol.Chem. (2006)
- Release Date
- 2006-05-09
- Peptides
- UDP-GlcNAc C6 dehydratase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE(Non-covalent)
- 2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- 1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Ishiyama, N. et al., Structural Studies of FlaA1 from Helicobacter pylori Reveal the Mechanism for Inverting 4,6-Dehydratase Activity. J.Biol.Chem. (2006)
- Release Date
- 2006-05-09
- Peptides
- UDP-GlcNAc C6 dehydratase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
A