SMTL ID : 2gs6.1

Crystal Structure of the active EGFR kinase domain in complex with an ATP analog-peptide conjugate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-2-2-mer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 1 residues within 4Å: Chain A: R.144 Ligand excluded by PLIP CL.3: 1 residues within 4Å: Chain C: R.144 Ligand excluded by PLIP

2 x 112: THIOPHOSPHORIC ACID O-((ADENOSYL-PHOSPHO)PHOSPHO)-S-ACETAMIDYL-DIESTER(Non-covalent)

112.2: 16 residues within 4Å: Chain A: L.26, A.30, F.31, V.34, A.51, K.53, T.98, Q.99, L.100, M.101, C.105, R.149, L.152, D.163 Chain B: E.4, Y.6 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.98, A:Q.99, A:M.101, A:C.105, A:D.163 Water bridges: A:R.149 Salt bridges: A:K.53, A:K.53 112.4: 16 residues within 4Å: Chain C: L.26, A.30, F.31, V.34, A.51, K.53, T.98, Q.99, L.100, M.101, C.105, R.149, L.152, D.163 Chain D: E.4, Y.6 9 PLIP interactions: 9 interactions with chain C Hydrogen bonds: C:T.98, C:Q.99, C:M.101, C:C.105, C:D.163, C:D.163 Water bridges: C:R.149 Salt bridges: C:K.53, C:K.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, X. et al., An Allosteric Mechanism for Activation of the Kinase Domain of Epidermal Growth Factor Receptor. Cell(Cambridge,Mass.) (2006)

Release Date

2006-06-20

Peptides

Epidermal growth factor receptor: AC
Peptide: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Epidermal growth factor receptor

Peptide

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