SMTL ID : 4wkq.1

1.85 angstrom structure of EGFR kinase domain with gefitinib

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x IRE: Gefitinib(Non-covalent)

IRE.1: 16 residues within 4Å: Chain A: L.26, A.51, K.53, E.70, M.74, L.96, T.98, Q.99, L.100, M.101, P.102, G.104, C.105, D.108, L.152, T.162 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:K.53, A:T.98, A:L.100, A:L.152 Hydrogen bonds: A:M.101 Water bridges: A:T.162 Salt bridges: A:D.108 Halogen bonds: A:L.96

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 1 residues within 4Å: Chain A: Q.284 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.284

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3: 6 residues within 4Å: Chain A: R.149, P.185, I.186, K.187, W.188, A.228 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.186, A:K.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yosaatmadja, Y. et al., 1.85 angstrom structure of EGFR kinase domain with gefitinib. To Be Published

Release Date

2014-11-05

Peptides

Epidermal growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Epidermal growth factor receptor

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