SMTL ID : 2gz7.1

Structure-Based Drug Design and Structural Biology Study of Novel Nonpeptide Inhibitors of SARS-CoV Main Protease

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

homo-dimer

Ligands

2 x D3F: 2-[(2,4-DICHLORO-5-METHYLPHENYL)SULFONYL]-1,3-DINITRO-5-(TRIFLUOROMETHYL)BENZENE(Non-covalent)

D3F.1: 13 residues within 4Å: Chain A: L.27, P.39, H.41, C.145, H.164, M.165, E.166, L.167, D.187, R.188, Q.189, T.190, Q.192 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:H.41, A:H.164, A:M.165 pi-Stacking: A:H.41 D3F.2: 13 residues within 4Å: Chain B: L.27, P.39, H.41, C.145, H.164, M.165, E.166, L.167, D.187, R.188, Q.189, T.190, Q.192 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:H.41, B:H.164, B:M.165 pi-Stacking: B:H.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, I.L. et al., Structure-Based Drug Design and Structural Biology Study of Novel Nonpeptide Inhibitors of Severe Acute Respiratory Syndrome Coronavirus Main Protease. J.Med.Chem. (2006)

Release Date

2006-08-29

Peptides

Replicase polyprotein 1ab: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Replicase polyprotein 1ab

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