SMTL ID : 2zu4.1 (1 other biounit)

Complex structure of SARS-CoV 3CL protease with TG-0204998

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

monomer

Ligands

1 x ZU3: N-[(BENZYLOXY)CARBONYL]-3-[(2,2-DIMETHYLPROPANOYL)AMINO]-L-ALANYL-N-[(1R)-4-OXO-1-{[(3S)-2-OXOPYRROLIDIN-3-YL]METHYL}PENTYL]-L-LEUCINAMIDE(Covalent)

ZU3.1: 22 residues within 4Å: Chain A: T.25, T.26, L.27, H.41, M.49, F.140, L.141, N.142, G.143, S.144, C.145, H.163, H.164, M.165, E.166, P.168, H.172, D.187, Q.189, T.190, A.191, Q.192 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:T.25, A:L.27, A:H.41, A:P.168 Hydrogen bonds: A:N.142, A:G.143, A:C.145, A:H.164, A:E.166, A:E.166, A:E.166, A:E.166, A:Q.189, A:Q.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, C.C. et al., Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds. J.Biol.Chem. (2009)

Release Date

2009-01-13

Peptides

3C-like proteinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3C-like proteinase

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