SMTL ID : 2gz8.1

Structure-Based Drug Design and Structural Biology Study of Novel Nonpeptide Inhibitors of SARS-CoV Main Protease

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.97 Å

Oligo State

homo-dimer

Ligands

2 x F3F: S-[5-(TRIFLUOROMETHYL)-4H-1,2,4-TRIAZOL-3-YL] 5-(PHENYLETHYNYL)FURAN-2-CARBOTHIOATE(Non-covalent)

F3F.1: 14 residues within 4Å: Chain A: T.26, H.41, L.141, N.142, G.143, S.144, C.145, M.165, E.166, P.168, R.188, Q.189, T.190, Q.192 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:P.168, A:Q.189, A:Q.192 Hydrogen bonds: A:N.142, A:G.143, A:S.144, A:C.145 F3F.2: 14 residues within 4Å: Chain B: T.26, H.41, L.141, N.142, G.143, S.144, C.145, M.165, E.166, P.168, R.188, Q.189, T.190, Q.192 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:P.168, B:Q.189, B:Q.192 Hydrogen bonds: B:N.142, B:G.143, B:S.144, B:C.145

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, I.L. et al., Structure-Based Drug Design and Structural Biology Study of Novel Nonpeptide Inhibitors of Severe Acute Respiratory Syndrome Coronavirus Main Protease. J.Med.Chem. (2006)

Release Date

2006-08-29

Peptides

Replicase polyprotein 1ab: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Replicase polyprotein 1ab

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