SMTL ID : 2hpa.3 (2 other biounits)

STRUCTURAL ORIGINS OF L(+)-TARTRATE INHIBITION OF HUMAN PROSTATIC ACID PHOSPHATASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-tetramer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG-BMA.1: 9 residues within 4Å: Chain B: N.272, L.274, P.277, N.301, E.302, Y.308 Chain D: S.316, P.320, E.322 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:S.316

5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: K.59, N.62, E.63 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:E.63 NAG.3: 4 residues within 4Å: Chain A: L.41, V.186, H.187, N.188 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.41 Hydrogen bonds: A:V.186 NAG.4: 5 residues within 4Å: Chain A: N.272, L.274, N.301, E.302, Y.308 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:E.302 Hydrogen bonds: A:N.272, A:N.301, A:E.302, A:E.302 NAG.8: 4 residues within 4Å: Chain C: V.186, H.187, N.188 Ligands: NAG-BMA-MAN.6 2 PLIP interactions: 2 interactions with chain C Hydrophobic interactions: C:H.187 Hydrogen bonds: C:H.187 NAG.10: 5 residues within 4Å: Chain D: N.272, L.274, N.301, E.302, Y.308 4 PLIP interactions: 4 interactions with chain D Hydrophobic interactions: D:E.302 Hydrogen bonds: D:N.272, D:N.301, D:E.302

3 x PT3: N-PROPYL-TARTRAMIC ACID(Non-covalent)

PT3.5: 8 residues within 4Å: Chain B: R.11, H.12, R.15, I.18, R.79, H.257, D.258, T.259 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:I.18 Hydrogen bonds: B:H.12, B:R.79, B:R.79, B:H.257, B:D.258, B:D.258, B:D.258 Salt bridges: B:R.11, B:H.12, B:R.15 PT3.9: 8 residues within 4Å: Chain C: R.11, H.12, R.15, I.18, R.79, F.171, H.257, D.258 13 PLIP interactions: 13 interactions with chain C Hydrophobic interactions: C:I.18, C:F.171 Hydrogen bonds: C:H.12, C:R.79, C:R.79, C:H.257, C:D.258, C:D.258, C:D.258 Water bridges: C:T.259 Salt bridges: C:R.11, C:H.12, C:R.15 PT3.11: 7 residues within 4Å: Chain D: R.11, H.12, R.15, I.18, R.79, H.257, D.258 12 PLIP interactions: 12 interactions with chain D Hydrophobic interactions: D:I.18, D:I.18 Hydrogen bonds: D:H.12, D:R.79, D:R.79, D:H.257, D:D.258, D:D.258, D:D.258 Salt bridges: D:R.11, D:H.12, D:R.15

1 x NAG- BMA- MAN: alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)

NAG-BMA-MAN.6: 1 residues within 4Å: Ligands: NAG.8 2 PLIP interactions: 2 interactions with chain C Water bridges: C:E.44, C:E.44

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.7: 5 residues within 4Å: Chain C: N.272, L.274, N.301, E.302, Y.308 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

LaCount, M.W. et al., Structural origins of L(+)-tartrate inhibition of human prostatic acid phosphatase. J.Biol.Chem. (1998)

Release Date

1998-09-16

Peptides

PROTEIN (ACID PHOSPHATASE): ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

C
A

D
B

PROTEIN (ACID PHOSPHATASE)

Related Entries With Identical Sequence