SMTL ID : 2jjt.1 (1 other biounit)

Structure of human CD47 in complex with human signal regulatory protein (SIRP) alpha

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain B: V.10, E.11, F.12, N.16, V.19, V.20 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:V.10, B:F.12, B:V.19 Hydrogen bonds: B:E.11, B:N.16, B:V.20 NAG.2: 1 residues within 4Å: Chain B: N.55 No protein-ligand interaction detected (PLIP) NAG.3: 3 residues within 4Å: Chain B: G.92, N.93, E.110 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.93, B:E.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hatherley, D. et al., Paired receptor specificity explained by structures of signal regulatory proteins alone and complexed with CD47. Mol. Cell (2008)

Release Date

2008-08-05

Peptides

TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE SUBSTRATE 1: A
LEUKOCYTE SURFACE ANTIGEN CD47: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE SUBSTRATE 1

LEUKOCYTE SURFACE ANTIGEN CD47

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