SMTL ID : 2jkt.1 (1 other biounit)

AP2 CLATHRIN ADAPTOR CORE with CD4 Dileucine peptide RM(phosphoS) EIKRLLSE Q to E mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

15 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: H.527, H.531, S.565, S.567, Q.568 Ligand excluded by PLIP SO4.2: 4 residues within 4Å: Chain A: R.11, G.12, Y.53, K.57 Ligand excluded by PLIP SO4.3: 6 residues within 4Å: Chain A: G.12, E.36, N.39, K.57, Y.58, K.61 Ligand excluded by PLIP SO4.4: 3 residues within 4Å: Chain A: K.618, K.619, K.620 Ligand excluded by PLIP SO4.5: 2 residues within 4Å: Chain A: K.617 Ligands: SO4.6 Ligand excluded by PLIP SO4.6: 5 residues within 4Å: Chain A: K.617, K.618, G.622, S.623 Ligands: SO4.5 Ligand excluded by PLIP SO4.7: 4 residues within 4Å: Chain A: R.177, T.213, Q.216 Chain E: E.122 Ligand excluded by PLIP SO4.8: 2 residues within 4Å: Chain B: R.304, H.575 Ligand excluded by PLIP SO4.9: 3 residues within 4Å: Chain B: E.268, K.312, R.313 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain B: K.372, R.375 Ligand excluded by PLIP SO4.11: 5 residues within 4Å: Chain B: R.371, K.372, R.375 Chain C: K.312, S.314 Ligand excluded by PLIP SO4.12: 4 residues within 4Å: Chain B: F.492, Q.504, L.530, S.531 Ligand excluded by PLIP SO4.13: 6 residues within 4Å: Chain C: Q.42, V.43, R.44, N.217, D.218, R.402 Ligand excluded by PLIP SO4.14: 3 residues within 4Å: Chain C: R.40, Q.41, Q.42 Ligand excluded by PLIP SO4.15: 2 residues within 4Å: Chain C: T.375, N.376 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kelly, B.T. et al., A Structural Explanation for the Binding of Endocytic Dileucine Motifs by the Ap2 Complex. Nature (2008)

Release Date

2008-10-28

Peptides

AP-2 COMPLEX SUBUNIT ALPHA-2: A
AP-2 COMPLEX SUBUNIT BETA-1: B
AP-2 COMPLEX SUBUNIT MU-1: C
CD4 PEPTIDE: D
AP-2 COMPLEX SUBUNIT SIGMA-1: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
M

D
P

E
S

AP-2 COMPLEX SUBUNIT ALPHA-2

AP-2 COMPLEX SUBUNIT BETA-1

AP-2 COMPLEX SUBUNIT MU-1

CD4 PEPTIDE

AP-2 COMPLEX SUBUNIT SIGMA-1

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