SMTL ID : 2jkt.2 (1 other biounit)

AP2 CLATHRIN ADAPTOR CORE with CD4 Dileucine peptide RM(phosphoS) EIKRLLSE Q to E mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

hetero-1-1-1-1-1-mer

Ligands

16 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.304, N.307, H.575 Ligand excluded by PLIP SO4.2: 5 residues within 4Å: Chain A: R.371, K.372, R.375 Chain E: K.312, S.314 Ligand excluded by PLIP SO4.3: 2 residues within 4Å: Chain A: K.372, R.375 Ligand excluded by PLIP SO4.4: 9 residues within 4Å: Chain A: M.74, K.78, R.108, C.112, K.147 Chain E: R.18, Y.20, D.117, F.118 Ligand excluded by PLIP SO4.5: 6 residues within 4Å: Chain C: H.527, H.531, V.562, S.565, S.567, Q.568 Ligand excluded by PLIP SO4.6: 6 residues within 4Å: Chain C: G.12, E.36, N.39, K.57, Y.58, K.61 Ligand excluded by PLIP SO4.7: 7 residues within 4Å: Chain B: D.75, N.76, Y.80, I.123 Chain C: V.259, K.260, R.263 Ligand excluded by PLIP SO4.8: 5 residues within 4Å: Chain C: M.10, R.11, G.12, Y.53, K.57 Ligand excluded by PLIP SO4.9: 2 residues within 4Å: Chain C: K.617 Ligands: SO4.10 Ligand excluded by PLIP SO4.10: 5 residues within 4Å: Chain C: K.617, K.618, G.622, S.623 Ligands: SO4.9 Ligand excluded by PLIP SO4.11: 2 residues within 4Å: Chain C: K.618, K.619 Ligand excluded by PLIP SO4.12: 3 residues within 4Å: Chain C: D.51, G.52, R.87 Ligand excluded by PLIP SO4.13: 6 residues within 4Å: Chain E: Q.42, V.43, R.44, N.217, D.218, R.402 Ligand excluded by PLIP SO4.14: 1 residues within 4Å: Chain E: R.357 Ligand excluded by PLIP SO4.15: 3 residues within 4Å: Chain E: R.40, Q.41, Q.42 Ligand excluded by PLIP SO4.16: 3 residues within 4Å: Chain A: Y.328 Chain E: K.405, H.416 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kelly, B.T. et al., A Structural Explanation for the Binding of Endocytic Dileucine Motifs by the Ap2 Complex. Nature (2008)

Release Date

2008-10-28

Peptides

AP-2 COMPLEX SUBUNIT BETA-1: A
AP-2 COMPLEX SUBUNIT SIGMA-1: B
AP-2 COMPLEX SUBUNIT ALPHA-2: C
CD4 PEPTIDE: D
AP-2 COMPLEX SUBUNIT MU-1: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
I

C
L

D
Q

E
U

AP-2 COMPLEX SUBUNIT BETA-1

AP-2 COMPLEX SUBUNIT SIGMA-1

AP-2 COMPLEX SUBUNIT ALPHA-2

CD4 PEPTIDE

AP-2 COMPLEX SUBUNIT MU-1

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