SMTL ID : 2nl9.1 (2 other biounits)

Crystal structure of the Mcl-1:Bim BH3 complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

hetero-1-1-mer

Ligands

7 x ZN: ZINC ION(Non-covalent)

ZN.1: 1 residues within 4Å: Chain A: E.122 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.122, A:E.122 ZN.2: 2 residues within 4Å: Chain A: D.143, E.147 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.143, A:D.143, A:E.147 ZN.3: 3 residues within 4Å: Chain A: H.82 Chain B: R.13 Ligands: ZN.4 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.82, H2O.5, H2O.8 ZN.4: 2 residues within 4Å: Chain A: H.82 Ligands: ZN.3 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.82, H2O.5, H2O.5 ZN.5: 3 residues within 4Å: Chain A: C.116, I.117 Ligands: ZN.6 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:C.116, H2O.4, H2O.4, H2O.4 ZN.6: 2 residues within 4Å: Chain A: C.116 Ligands: ZN.5 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:C.116, H2O.5 ZN.8: 1 residues within 4Å: Chain B: E.11 3 PLIP interactions: 2 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:E.11, B:E.11, H2O.8

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 2 residues within 4Å: Chain A: I.81, R.130 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Czabotar, P.E. et al., Structural insights into the degradation of Mcl-1 induced by BH3 domains. Proc.Natl.Acad.Sci.USA (2007)

Release Date

2007-03-27

Peptides

FUSION PROTEIN CONSISTING OF Induced myeloid leukemia cell differentiation protein Mcl-1 homolog: A
Bcl-2-like protein 11: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

FUSION PROTEIN CONSISTING OF Induced myeloid leukemia cell differentiation protein Mcl-1 homolog

Bcl-2-like protein 11

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