SMTL ID : 2o5i.1 (1 other biounit)

Crystal structure of the T. thermophilus RNA polymerase elongation complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-2-1-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain G: C.58, A.59, C.60, C.73, C.76 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:C.58, G:C.60, G:C.73, G:C.76 ZN.2: 4 residues within 4Å: Chain G: C.1112, C.1194, C.1201, C.1204 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:C.1112, G:C.1194, G:C.1201, G:C.1204

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain B: G.16 Chain G: D.739, D.741, D.743 4 PLIP interactions: 4 interactions with chain G Metal complexes: G:D.739, G:D.741, G:D.743, G:D.743

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vassylyev, D.G. et al., Structural basis for transcription elongation by bacterial RNA polymerase. Nature (2007)

Release Date

2007-07-03

Peptides

DNA-directed RNA polymerase alpha chain: DE
DNA-directed RNA polymerase beta chain: F
DNA-directed RNA polymerase beta' chain: G
DNA-directed RNA polymerase omega chain: H

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

D
A

E
B

F
C

G
D

H
E

DNA-directed RNA polymerase alpha chain

DNA-directed RNA polymerase beta chain

DNA-directed RNA polymerase beta' chain

DNA-directed RNA polymerase omega chain

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