SMTL ID : 4oir.1

Crystal structure of Thermus thermophilus RNA polymerase transcription initiation complex soaked with GE23077 and rifamycin SV

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.11 Å
Oligo State
hetero-2-1-1-1-1-mer
Ligands
1 x 2RA- DSN- DVA- R2T- 2TL- 0QZ- FGL: GE23077(Non-covalent)
4 x MG: MAGNESIUM ION(Non-covalent)
1 x RFV: rifamycin SV(Non-covalent)
2 x ZN: ZINC ION(Non-covalent)
1 x MB8: (2Z)-2-methylbut-2-enoic acid(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Zhang, Y. et al., GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides. Elife (2014)
Release Date
2014-05-07
Peptides
DNA-directed RNA polymerase subunit alpha: AB
DNA-directed RNA polymerase subunit beta: C
DNA-directed RNA polymerase subunit beta': D
DNA-directed RNA polymerase subunit omega: E
DNA directed RNA polymerase sigma factor A: F
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F

DNA-directed RNA polymerase subunit alpha

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase subunit beta'

DNA-directed RNA polymerase subunit omega

DNA directed RNA polymerase sigma factor A

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1iw7.1 | 1iw7.2 | 1smy.1 | 1smy.2 | 1zyr.1 | 1zyr.2 | 2a68.1 | 2a68.2 | 2a69.1 | 2a69.2 | 2a6e.1 | 2a6e.2 | 2a6h.1 | 2a6h.2 | 2be5.1 | 2be5.2 | 2cw0.1 | 2cw0.2 | 2o5i.1 | 2o5i.2 | 2o5j.1 | 2o5j.2 | 2ppb.1 | 2ppb.2 | 3aoh.1 | 3aoh.2 | 3aoh.3 | 3aoi.1 | 3aoi.2 | 3aoi.3  more...