SMTL ID : 3dxj.1 (1 other biounit)

Crystal structure of thermus thermophilus rna polymerase holoenzyme in complex with the antibiotic myxopyronin

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.00 Å
Oligo State
hetero-oligomer
Ligands
2 x PO4: PHOSPHATE ION(Non-functional Binders)
2 x MG: MAGNESIUM ION(Non-covalent)
2 x ZN: ZINC ION(Non-covalent)
1 x NE6: METHYL [(1E,5R)-5-{(3S)-3-[(2E,4E)-2,5-DIMETHYLOCTA-2,4-DIENOYL]-2,4-DIOXO-3,4-DIHYDRO-2H-PYRAN-6-YL}HEXYLIDENE]CARBAMATE(Non-covalent)
2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Mukhopadhyay, J. et al., The RNA polymerase "switch region" is a target for inhibitors. Cell(Cambridge,Mass.) (2008)
Release Date
2008-10-14
Peptides
DNA-directed RNA polymerase subunit alpha; CHAIN A, B, K, L: AB
BACTERIAL RNA POLYMERASE BETA SUBUNIT; CHAIN C, M: C
BACTERIAL RNA POLYMERASE BETA-PRIME SUBUNIT; CHAIN D, N: D
BACTERIAL RNA POLYMERASE OMEGA SUBUNIT; CHAIN E, O: E
RNA polymerase pricipal sigma factor (RpoD); CHAIN F, P: F
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
E
E
F
F

DNA-directed RNA polymerase subunit alpha; CHAIN A, B, K, L

BACTERIAL RNA POLYMERASE BETA SUBUNIT; CHAIN C, M

BACTERIAL RNA POLYMERASE BETA-PRIME SUBUNIT; CHAIN D, N

BACTERIAL RNA POLYMERASE OMEGA SUBUNIT; CHAIN E, O

RNA polymerase pricipal sigma factor (RpoD); CHAIN F, P

Related Entries With Identical Sequence

1iw7.1 | 1iw7.2 | 1smy.1 | 1smy.2 | 1zyr.1 | 1zyr.2 | 2a68.1 | 2a68.2 | 2a69.1 | 2a69.2 | 2a6e.1 | 2a6e.2 | 2a6h.1 | 2a6h.2 | 2be5.1 | 2be5.2 | 2cw0.1 | 2cw0.2 | 2o5i.1 | 2o5i.2 | 2o5j.1 | 2o5j.2 | 2ppb.1 | 2ppb.2 | 3aoh.1 | 3aoh.2 | 3aoh.3 | 3aoi.1 | 3aoi.2 | 3aoi.3  more...