SMTL ID : 2oz3.3 (2 other biounits)

Crystal structure of L-Rhamnonate dehydratase from Azotobacter vinelandii

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-octamer

Ligands

16 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: W.107, D.108, Y.111, N.112, R.275, W.276 Chain B: K.42 Ligand excluded by PLIP GOL.2: 5 residues within 4Å: Chain B: V.154, R.155, Q.334 Chain D: K.42, Y.43 Ligand excluded by PLIP GOL.3: 5 residues within 4Å: Chain B: W.107, D.108, N.112, R.275, W.276 Ligand excluded by PLIP GOL.4: 6 residues within 4Å: Chain C: D.108, N.112, R.275, W.276 Chain D: K.42, P.246 Ligand excluded by PLIP GOL.5: 9 residues within 4Å: Chain B: E.104, W.135, L.149, L.304 Chain C: L.149, L.150, G.151, L.304, R.333 Ligand excluded by PLIP GOL.6: 7 residues within 4Å: Chain C: K.42 Chain D: W.107, D.108, Y.111, N.112, R.275 Chain E: Q.334 Ligand excluded by PLIP GOL.7: 6 residues within 4Å: Chain D: E.104, L.304 Chain E: W.135, L.149, L.150, R.333 Ligand excluded by PLIP GOL.8: 8 residues within 4Å: Chain B: K.239, M.265, L.316, F.338 Chain D: P.186, D.222, N.224, Y.225 Ligand excluded by PLIP GOL.9: 7 residues within 4Å: Chain E: W.107, D.108, Y.111, N.112, R.275, W.276 Chain F: K.42 Ligand excluded by PLIP GOL.10: 5 residues within 4Å: Chain F: V.154, R.155, Q.334 Chain H: K.42, Y.43 Ligand excluded by PLIP GOL.11: 5 residues within 4Å: Chain F: W.107, D.108, N.112, R.275, W.276 Ligand excluded by PLIP GOL.12: 6 residues within 4Å: Chain G: D.108, N.112, R.275, W.276 Chain H: K.42, P.246 Ligand excluded by PLIP GOL.13: 9 residues within 4Å: Chain F: E.104, W.135, L.149, L.304 Chain G: L.149, L.150, G.151, L.304, R.333 Ligand excluded by PLIP GOL.14: 7 residues within 4Å: Chain A: Q.334 Chain G: K.42 Chain H: W.107, D.108, Y.111, N.112, R.275 Ligand excluded by PLIP GOL.15: 6 residues within 4Å: Chain A: W.135, L.149, L.150, R.333 Chain H: E.104, L.304 Ligand excluded by PLIP GOL.16: 8 residues within 4Å: Chain F: K.239, M.265, L.316, F.338 Chain H: P.186, D.222, N.224, Y.225 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patskovsky, Y. et al., Crystal structure of L-Rhamnonate dehydratase from azotobacter vinelandii. To be Published

Release Date

2007-03-06

Peptides

Mandelate racemase/muconate lactonizing enzyme: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

C
G

D
H

E
E

F
F

G
G

H
H

Mandelate racemase/muconate lactonizing enzyme

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