SMTL ID : 3ekg.2 (1 other biounit)

CRYSTAL STRUCTURE OF L-RHAMNONATE DEHYDRATASE FROM AZOTOBACTER VINELANDII complexed with Mg and L-TARTRATE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.1: 12 residues within 4Å: Chain A: H.24, R.50, T.163, K.179, D.216, W.218, E.242, E.270, H.320, E.340, L.342 Ligands: MG.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.216, A:E.270 Water bridges: A:D.216, A:D.216 Salt bridges: A:H.24, A:R.50, A:K.179, A:H.320 TLA.3: 12 residues within 4Å: Chain B: H.24, R.50, T.163, K.179, D.216, W.218, E.242, E.270, H.320, E.340, L.342 Ligands: MG.4 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:E.270 Water bridges: B:Y.161, B:E.270 Salt bridges: B:H.24, B:R.50, B:K.179, B:H.320

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: K.179, D.216, E.242, E.270 Ligands: TLA.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.216, A:E.242, A:E.270, H2O.1 MG.4: 5 residues within 4Å: Chain B: K.179, D.216, E.242, E.270 Ligands: TLA.3 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.216, B:E.242, B:E.270, H2O.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fedorov, A.A. et al., CRYSTAL STRUCTURE OF L-RHAMNONATE DEHYDRATASE FROM AZOTOBACTER VINELANDII complexed with Mg and L-TARTRATE. To be Published

Release Date

2008-09-30

Peptides

Mandelate racemase/muconate lactonizing enzyme: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mandelate racemase/muconate lactonizing enzyme

Related Entries With Identical Sequence