- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.74 Å
- Oligo State
- homo-16-mer
- Ligands
- 8 x CL: CHLORIDE ION(Non-functional Binders)
- 16 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
TRS.2: 8 residues within 4Å:- Chain A: H.30, E.48, G.50, S.51, F.52, T.110, H.111, V.112
Ligand excluded by PLIPTRS.5: 7 residues within 4Å:- Chain B: E.48, G.50, S.51, F.56, T.110, H.111, V.112
Ligand excluded by PLIPTRS.7: 8 residues within 4Å:- Chain C: H.30, E.48, G.50, S.51, F.52, T.110, H.111, V.112
Ligand excluded by PLIPTRS.10: 7 residues within 4Å:- Chain D: E.48, G.50, S.51, F.56, T.110, H.111, V.112
Ligand excluded by PLIPTRS.12: 8 residues within 4Å:- Chain E: H.30, E.48, G.50, S.51, F.52, T.110, H.111, V.112
Ligand excluded by PLIPTRS.15: 7 residues within 4Å:- Chain F: E.48, G.50, S.51, F.56, T.110, H.111, V.112
Ligand excluded by PLIPTRS.17: 8 residues within 4Å:- Chain G: H.30, E.48, G.50, S.51, F.52, T.110, H.111, V.112
Ligand excluded by PLIPTRS.20: 7 residues within 4Å:- Chain H: E.48, G.50, S.51, F.56, T.110, H.111, V.112
Ligand excluded by PLIPTRS.22: 8 residues within 4Å:- Chain I: H.30, E.48, G.50, S.51, F.52, T.110, H.111, V.112
Ligand excluded by PLIPTRS.25: 7 residues within 4Å:- Chain J: E.48, G.50, S.51, F.56, T.110, H.111, V.112
Ligand excluded by PLIPTRS.27: 8 residues within 4Å:- Chain K: H.30, E.48, G.50, S.51, F.52, T.110, H.111, V.112
Ligand excluded by PLIPTRS.30: 7 residues within 4Å:- Chain L: E.48, G.50, S.51, F.56, T.110, H.111, V.112
Ligand excluded by PLIPTRS.32: 8 residues within 4Å:- Chain M: H.30, E.48, G.50, S.51, F.52, T.110, H.111, V.112
Ligand excluded by PLIPTRS.35: 7 residues within 4Å:- Chain N: E.48, G.50, S.51, F.56, T.110, H.111, V.112
Ligand excluded by PLIPTRS.37: 8 residues within 4Å:- Chain O: H.30, E.48, G.50, S.51, F.52, T.110, H.111, V.112
Ligand excluded by PLIPTRS.40: 7 residues within 4Å:- Chain P: E.48, G.50, S.51, F.56, T.110, H.111, V.112
Ligand excluded by PLIP- 8 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
MPD.3: 4 residues within 4Å:- Chain A: V.164, T.165, E.166, F.169
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:F.169
- Water bridges: A:V.164
MPD.8: 4 residues within 4Å:- Chain C: V.164, T.165, E.166, F.169
2 PLIP interactions:2 interactions with chain C- Hydrophobic interactions: C:F.169
- Water bridges: C:V.164
MPD.13: 4 residues within 4Å:- Chain E: V.164, T.165, E.166, F.169
2 PLIP interactions:2 interactions with chain E- Hydrophobic interactions: E:F.169
- Water bridges: E:V.164
MPD.18: 4 residues within 4Å:- Chain G: V.164, T.165, E.166, F.169
2 PLIP interactions:2 interactions with chain G- Hydrophobic interactions: G:F.169
- Water bridges: G:V.164
MPD.23: 4 residues within 4Å:- Chain I: V.164, T.165, E.166, F.169
2 PLIP interactions:2 interactions with chain I- Hydrophobic interactions: I:F.169
- Water bridges: I:V.164
MPD.28: 4 residues within 4Å:- Chain K: V.164, T.165, E.166, F.169
2 PLIP interactions:2 interactions with chain K- Hydrophobic interactions: K:F.169
- Water bridges: K:V.164
MPD.33: 4 residues within 4Å:- Chain M: V.164, T.165, E.166, F.169
2 PLIP interactions:2 interactions with chain M- Hydrophobic interactions: M:F.169
- Water bridges: M:V.164
MPD.38: 4 residues within 4Å:- Chain O: V.164, T.165, E.166, F.169
2 PLIP interactions:2 interactions with chain O- Hydrophobic interactions: O:F.169
- Water bridges: O:V.164
- 8 x NA: SODIUM ION(Non-functional Binders)
NA.4: 4 residues within 4Å:- Chain B: N.249, Q.250
- Chain G: H.115, D.117
4 PLIP interactions:1 interactions with chain G, 3 interactions with chain B- Hydrogen bonds: G:D.117, B:Q.250, B:Q.250
- Water bridges: B:N.249
NA.9: 4 residues within 4Å:- Chain D: N.249, Q.250
- Chain E: H.115, D.117
4 PLIP interactions:2 interactions with chain E, 2 interactions with chain D- Hydrogen bonds: E:D.117, E:D.117, D:Q.250
- Water bridges: D:N.249
NA.14: 4 residues within 4Å:- Chain A: H.115, D.117
- Chain F: N.249, Q.250
4 PLIP interactions:1 interactions with chain A, 3 interactions with chain F- Hydrogen bonds: A:D.117, F:N.249, F:Q.250
- Water bridges: F:N.249
NA.19: 4 residues within 4Å:- Chain C: H.115, D.117
- Chain H: N.249, Q.250
4 PLIP interactions:2 interactions with chain C, 2 interactions with chain H- Hydrogen bonds: C:H.115, C:D.117, H:Q.250
- Water bridges: H:N.249
NA.24: 4 residues within 4Å:- Chain J: N.249, Q.250
- Chain O: H.115, D.117
5 PLIP interactions:3 interactions with chain J, 2 interactions with chain O- Hydrogen bonds: J:Q.250, J:Q.250, O:D.117, O:D.117
- Water bridges: J:N.249
NA.29: 4 residues within 4Å:- Chain L: N.249, Q.250
- Chain M: H.115, D.117
5 PLIP interactions:1 interactions with chain M, 4 interactions with chain L- Hydrogen bonds: M:D.117, L:Q.250, L:Q.250, L:Q.250
- Water bridges: L:N.249
NA.34: 4 residues within 4Å:- Chain I: H.115, D.117
- Chain N: N.249, Q.250
5 PLIP interactions:3 interactions with chain N, 2 interactions with chain I- Hydrogen bonds: N:Q.250, N:Q.250, I:D.117, I:D.117
- Water bridges: N:N.249
NA.39: 4 residues within 4Å:- Chain K: H.115, D.117
- Chain P: N.249, Q.250
5 PLIP interactions:4 interactions with chain P, 1 interactions with chain K- Hydrogen bonds: P:N.249, P:Q.250, P:Q.250, K:D.117
- Water bridges: P:N.249
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Joint Center for Structural Genomics (JCSG), Crystal structure of hypothetical protein (YP_049838.1) from Erwinia carotovora atroseptica SCRI1043 at 1.74 A resolution. To be published
- Release Date
- 2007-04-03
- Peptides
- Hypothetical protein: ABCDEFGHIJKLMNOP
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
BG
AH
BI
AJ
BK
AL
BM
AN
BO
AP
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.74 Å
- Oligo State
- homo-16-mer
- Ligands
- 8 x CL: CHLORIDE ION(Non-functional Binders)
- 16 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- 8 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)
- 8 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Joint Center for Structural Genomics (JCSG), Crystal structure of hypothetical protein (YP_049838.1) from Erwinia carotovora atroseptica SCRI1043 at 1.74 A resolution. To be published
- Release Date
- 2007-04-03
- Peptides
- Hypothetical protein: ABCDEFGHIJKLMNOP
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
BE
AF
BG
AH
BI
AJ
BK
AL
BM
AN
BO
AP
B