SMTL ID : 2pqw.1

Crystal structure of L3MBTL1 in complex with H4K20Me2 (residues 17-25), trigonal form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x ARG- HIS- ARG- MLY- VAL- LEU- ARG- ASP- ASN: Histone H4(Non-covalent)

ARG-HIS-ARG-MLY-VAL-LEU-ARG-ASP-ASN.1: 7 residues within 4Å: Chain A: D.156, N.159, L.162, C.164, F.180, W.183, Y.187 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.162 Hydrogen bonds: A:N.159, A:N.159 Water bridges: A:Y.187 Salt bridges: A:D.156 pi-Cation interactions: A:W.183, A:W.183

3 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 2 residues within 4Å: Chain A: A.94, W.117 2 PLIP interactions: 2 interactions with chain A Water bridges: A:A.94, A:K.131 ACT.3: 3 residues within 4Å: Chain A: D.49, F.57, H.80 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:D.49 ACT.4: 3 residues within 4Å: Chain A: G.149, T.232, G.233 3 PLIP interactions: 3 interactions with chain A Water bridges: A:K.151, A:K.151 Salt bridges: A:K.151

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Min, J. et al., L3MBTL1 recognition of mono- and dimethylated histones. Nat.Struct.Mol.Biol. (2007)

Release Date

2007-07-31

Peptides

Lethal(3)malignant brain tumor-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lethal(3)malignant brain tumor-like protein

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