SMTL ID : 2qk5.2 (1 other biounit)

Structure of BACE1 bound to SCH626485

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x CS5: N'-{(1S,2R)-1-(3,5-DIFLUOROBENZYL)-2-HYDROXY-3-[(3-METHOXYBENZYL)AMINO]PROPYL}-5-METHYL-N,N-DIPROPYLISOPHTHALAMIDE(Non-covalent)

CS5.1: 21 residues within 4Å: Chain A: G.20, Q.21, L.39, D.41, G.43, S.44, P.79, Y.80, T.81, Q.82, G.83, K.116, F.117, I.119, W.124, Y.207, D.237, G.239, T.240, T.241, R.244 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:L.39, A:Y.80, A:Y.80, A:T.81, A:Q.82, A:F.117, A:Y.207 Hydrogen bonds: A:D.41, A:T.81, A:T.81, A:Q.82, A:D.237, A:G.239, A:T.241 Water bridges: A:R.137, A:D.237, A:N.242 pi-Stacking: A:Y.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iserloh, U. et al., Potent pyrrolidine- and piperidine-based BACE-1 inhibitors. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-03-11

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

Related Entries With Identical Sequence