SMTL ID : 2qmg.2 (1 other biounit)

Structure of BACE Bound to SCH745966

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

monomer

Ligands

1 x SC6: N-{(1S,2R)-1-(3,5-DIFLUOROBENZYL)-2-HYDROXY-2-[(2R,4R)-4-PHENOXYPYRROLIDIN-2-YL]ETHYL}-3-{[(2R)-2-(METHOXYMETHYL)PYRROLIDIN-1-YL]CARBONYL}-5-METHYLBENZAMIDE(Non-covalent)

SC6.1: 25 residues within 4Å: Chain A: G.20, G.22, L.39, D.41, G.43, S.44, P.79, Y.80, T.81, Q.82, G.83, K.116, F.117, I.119, W.124, I.127, R.137, Y.207, I.235, D.237, S.238, G.239, T.240, T.241, R.244 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:L.39, A:Y.80, A:Q.82, A:I.119, A:I.127 Hydrogen bonds: A:D.41, A:G.43, A:T.81, A:T.81, A:Q.82, A:Y.207, A:G.239, A:T.241 Water bridges: A:N.242 pi-Stacking: A:Y.80

1 x TAR: D(-)-TARTARIC ACID(Non-covalent)

TAR.2: 5 residues within 4Å: Chain A: R.16, N.37, H.58, R.59, N.123 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.37, A:H.58, A:N.123 Water bridges: A:R.59, A:R.59, A:R.59, A:N.123 Salt bridges: A:R.16, A:H.58, A:R.59, A:R.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iserloh, U. et al., Discovery of an orally efficaceous 4-phenoxypyrrolidine-based BACE-1 inhibitor. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-03-18

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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