SMTL ID : 2vq7.2 (1 other biounit)

Bacterial flavin-containing monooxygenase in complex with NADP: native data

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 31 residues within 4Å: Chain A: G.14, G.16, P.17, S.18, F.42, E.43, K.44, Q.45, G.50, Q.51, W.52, H.68, S.70, M.71, L.75, S.77, N.78, L.84, T.129, A.130, V.131, C.166, T.167, G.168, F.170, F.285, Q.323, S.326, F.327, F.330 Ligands: NAP.2 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:L.75, A:F.170 Hydrogen bonds: A:G.16, A:S.18, A:S.18, A:K.44, A:Q.45, A:G.50, A:Q.51, A:Q.51, A:W.52, A:N.78, A:N.78, A:V.131, A:V.131, A:S.326 Water bridges: A:G.19, A:K.44, A:Q.323 Salt bridges: A:H.68 pi-Stacking: A:W.52 pi-Cation interactions: A:K.44 FAD.5: 30 residues within 4Å: Chain B: G.14, G.16, P.17, S.18, F.42, E.43, K.44, Q.45, G.50, Q.51, W.52, H.68, S.70, M.71, L.75, S.77, N.78, T.129, A.130, V.131, C.166, T.167, G.168, F.170, F.285, Q.323, S.326, F.327, F.330 Ligands: NAP.6 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:L.75, B:F.170 Hydrogen bonds: B:G.16, B:S.18, B:S.18, B:K.44, B:Q.45, B:G.50, B:Q.51, B:Q.51, B:W.52, B:N.78, B:N.78, B:V.131, B:V.131, B:S.326 Salt bridges: B:H.68 pi-Stacking: B:W.52 pi-Cation interactions: B:K.44

2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.2: 24 residues within 4Å: Chain A: Y.72, L.75, W.76, N.78, F.170, Y.174, P.176, F.178, V.208, G.209, S.210, S.211, Y.212, S.213, D.216, R.234, T.235, N.251, C.276, T.277, G.278, Y.279, R.417 Ligands: FAD.1 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:D.216 Hydrogen bonds: A:W.76, A:N.78, A:S.210, A:S.210, A:S.211, A:Y.212, A:S.213, A:S.213, A:R.234, A:R.234, A:T.235, A:N.251, A:N.296, A:R.417 Salt bridges: A:R.234 pi-Cation interactions: A:R.234 NAP.6: 24 residues within 4Å: Chain B: Y.72, L.75, W.76, N.78, F.170, Y.174, P.176, F.178, V.208, G.209, S.210, S.211, Y.212, S.213, D.216, R.234, T.235, N.251, C.276, T.277, G.278, Y.279, R.417 Ligands: FAD.5 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:D.216 Hydrogen bonds: B:Y.72, B:W.76, B:N.78, B:S.210, B:S.210, B:S.211, B:Y.212, B:S.213, B:S.213, B:R.234, B:R.234, B:T.235, B:N.251, B:G.278, B:N.296, B:R.417 Salt bridges: B:R.234 pi-Cation interactions: B:R.234

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.3: 4 residues within 4Å: Chain A: A.87, T.90, S.392, M.425 No protein-ligand interaction detected (PLIP)

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 1 residues within 4Å: Chain A: R.24 Ligand excluded by PLIP CL.7: 2 residues within 4Å: Chain B: R.24, Q.27 Ligand excluded by PLIP

1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.8: 4 residues within 4Å: Chain B: R.9, R.126, Y.156, A.158 3 PLIP interactions: 3 interactions with chain B Salt bridges: B:R.9, B:R.126 pi-Cation interactions: B:Y.156

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alfieri, A. et al., Revealing the Moonlighting Role of Nadp in the Structure of a Flavin-Containing Monooxygenase. Proc.Natl.Acad.Sci.USA (2008)

Release Date

2008-04-22

Peptides

FLAVIN-CONTAINING MONOOXYGENASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

FLAVIN-CONTAINING MONOOXYGENASE

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