SMTL ID : 2vu1.1

Biosynthetic thiolase from Z. ramigera. Complex of with O-pantheteine- 11-pivalate.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.51 Å

Oligo State

homo-tetramer

Ligands

2 x OPI: PANTOTHENYL-AMINOETHANOL-11-PIVALIC ACID(Non-covalent)

OPI.1: 10 residues within 4Å: Chain A: L.148, H.156, F.235, A.243, S.247, L.249, A.318, F.319, H.348 Chain D: M.134 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:F.235 Hydrogen bonds: A:S.247, A:A.318 Water bridges: A:M.157, A:L.249 OPI.5: 10 residues within 4Å: Chain B: H.156, F.235, A.243, S.247, G.248, L.249, A.318, F.319, H.348 Chain C: M.134 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:F.235, B:A.243 Hydrogen bonds: B:G.248, B:L.249, B:A.318 Water bridges: B:Y.218, B:A.243

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: N.24, E.29 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.29 Water bridges: A:K.205

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: S.260, A.262, E.263, R.266 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.260, A:E.263 Water bridges: A:S.109, A:S.260 Salt bridges: A:R.266 SO4.4: 3 residues within 4Å: Chain A: K.298, R.302 Chain B: G.106 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.298, A:R.302 SO4.6: 4 residues within 4Å: Chain A: G.106 Chain B: K.298, E.301, R.302 5 PLIP interactions: 5 interactions with chain B Water bridges: B:K.298, B:R.302, B:R.302 Salt bridges: B:K.298, B:R.302 SO4.7: 4 residues within 4Å: Chain B: S.260, A.262, E.263, R.266 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:S.260, B:S.260 Water bridges: B:S.260, B:E.261 Salt bridges: B:R.266 SO4.8: 3 residues within 4Å: Chain D: R.194, E.364, R.367 1 PLIP interactions: 1 interactions with chain D Salt bridges: D:R.194

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Merilainen, G. et al., The Sulfur Atoms of the Substrate Coa and the Catalytic Cysteine are Required for a Productive Mode of Substrate Binding in Bacterial Biosynthetic Thiolase, a Thioester-Dependent Enzyme. FEBS J. (2008)

Release Date

2008-10-28

Peptides

ACETYL-COA ACETYLTRANSFERASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

ACETYL-COA ACETYLTRANSFERASE

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