SMTL ID : 2vx3.4 (3 other biounits)

Crystal structure of the human dual specificity tyrosine- phosphorylation-regulated kinase 1A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x D15: N-(5-{[(2S)-4-amino-2-(3-chlorophenyl)butanoyl]amino}-1H-indazol-3-yl)benzamide

D15.1: 21 residues within 4Å: Chain A: I.62, G.63, K.64, G.65, G.68, Q.69, V.70, A.83, K.85, F.135, E.136, M.137, L.138, S.139, Y.140, N.189, L.191, V.203, D.204 Ligands: CL.2, SO4.4 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.62, A:V.70, A:F.135, A:Y.140, A:L.191, A:D.204 Hydrogen bonds: A:E.136, A:L.138, A:L.138, A:N.189, A:D.204, A:D.204

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: K.85, D.204 Ligands: D15.1 Ligand excluded by PLIP CL.5: 1 residues within 4Å: Chain A: R.123 Ligand excluded by PLIP CL.6: 2 residues within 4Å: Chain A: N.194, R.197 Ligand excluded by PLIP

1 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)

P6G.3: 4 residues within 4Å: Chain A: D.59, K.72, W.81, M.137 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.72

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 4 residues within 4Å: Chain A: G.65, S.66, K.186 Ligands: D15.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.66, A:S.66 Salt bridges: A:K.186

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Soundararajan, M. et al., Structures of Down Syndrome Kinases, Dyrks, Reveal Mechanisms of Kinase Activation and Substrate Recognition. Structure (2013)

Release Date

2008-09-16

Peptides

DUAL SPECIFICITY TYROSINE-PHOSPHORYLATION- REGULATED KINASE 1A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

DUAL SPECIFICITY TYROSINE-PHOSPHORYLATION- REGULATED KINASE 1A

Related Entries With Identical Sequence