SMTL ID : 2wf4.1

Human BACE-1 in complex with 6-ethyl-1-methyl-N-((1S)-2-oxo-1-(phenylmethyl)-3-(tetrahydro-2H-pyran-4-ylamino)propyl)-1,3,4,6- tetrahydro(1,2)thiazepino(5,4,3-cd)indole-8-carboxamide 2,2-dioxide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x ZY4: N-[(1S)-1-BENZYL-2,2-DIHYDROXY-3-(TETRAHYDRO-2H-PYRAN-4-YLAMINO)PROPYL]-6-ETHYL-1-METHYL-1,3,4,6-TETRAHYDRO[1,2]THIAZEPINO[5,4,3-CD]INDOLE-8-CARBOXAMIDE 2,2-DIOXIDE(Non-covalent)

ZY4.1: 24 residues within 4Å: Chain A: G.12, Q.13, G.14, L.31, D.33, G.35, S.36, Y.72, T.73, Q.74, F.109, I.111, W.116, I.119, Y.199, I.227, D.229, G.231, T.232, T.233, N.234, R.236, S.326, V.333 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:L.31, A:Y.72, A:Q.74, A:F.109, A:F.109, A:W.116, A:W.116, A:I.119, A:Y.199, A:I.227 Hydrogen bonds: A:T.73, A:T.73, A:Q.74, A:G.231, A:T.232, A:T.232, A:T.233, A:N.234, A:N.234, A:S.326 Water bridges: A:K.225 pi-Stacking: A:Y.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Charrier, N. et al., Second Generation of Bace-1 Inhibitors Part 3: Towards Non Hydroxyethylamine Transition State Mimetics. Bioorg.Med.Chem.Lett. (2009)

Release Date

2009-05-12

Peptides

BETA-SECRETASE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BETA-SECRETASE 1

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