SMTL ID : 2woa.2 (3 other biounits)

MMP12 COMPLEX WITH A BETA HYDROXY CARBOXYLIC ACID

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.31, K.32, Q.35 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.35, A:Q.35 Salt bridges: A:R.31, A:K.32

1 x 023: N^2^-[(2R)-2-{(1S)-1-[FORMYL(HYDROXY)AMINO]ETHYL}-5-PHENYLPENTANOYL]-N,3-DIMETHYL-L-VALINAMIDE(Non-covalent)

023.2: 16 residues within 4Å: Chain A: G.75, I.76, L.77, A.78, L.110, T.111, H.114, E.115, H.118, H.124, V.131, P.134, T.135, Y.136, K.137 Ligands: ZN.3 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.110, A:H.114, A:T.135, A:Y.136, A:K.137 Hydrogen bonds: A:G.75, A:L.77, A:P.134, A:Y.136 Salt bridges: A:E.115

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: H.114, H.118, H.124 Ligands: 023.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.114, A:H.118, A:H.124 ZN.4: 4 residues within 4Å: Chain A: H.64, D.66, H.79, H.92 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.64, A:D.66, A:H.79, A:H.92

3 x CA: CALCIUM ION(Non-covalent)

CA.5: 6 residues within 4Å: Chain A: D.71, G.72, G.74, I.76, D.94, E.97 6 PLIP interactions: 6 interactions with chain A Metal complexes: A:D.71, A:G.72, A:G.74, A:I.76, A:D.94, A:E.97 CA.6: 5 residues within 4Å: Chain A: D.54, G.86, I.87, G.88, D.90 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.54, A:G.86, A:G.88, A:D.90, H2O.47, H2O.73 CA.7: 3 residues within 4Å: Chain A: D.20, E.95, E.97 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.20, A:E.95, A:E.95, A:E.97, H2O.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Holmes, I.P. et al., The Identification of Beta-Hydroxy Carboxylic Acids as Selective Mmp-12 Inhibitors. Bioorg.Med.Chem.Lett. (2009)

Release Date

2009-09-08

Peptides

MACROPHAGE METALLOELASTASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

MACROPHAGE METALLOELASTASE

Related Entries With Identical Sequence