SMTL ID : 2xj7.1

BtGH84 in complex with 6-acetamido-6-deoxy-castanospermine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x GC2: 6-ACETAMIDO-6-DEOXY-CASTANOSPERMINE

GC2.1: 17 residues within 4Å: Chain A: G.135, F.136, Y.137, K.166, D.242, D.243, C.278, Y.282, T.310, V.314, I.315, W.337, N.339, V.342, D.344, Y.345, N.372 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:Y.282, A:T.310, A:V.314, A:I.315, A:W.337, A:Y.345 Hydrogen bonds: A:G.135, A:K.166, A:K.166, A:D.242, A:D.242, A:N.339, A:D.344, A:N.372 Salt bridges: A:D.243, A:D.344 GC2.3: 17 residues within 4Å: Chain B: G.135, F.136, Y.137, K.166, D.242, D.243, C.278, Y.282, T.310, V.314, I.315, W.337, N.339, V.342, D.344, Y.345, N.372 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:D.242, B:Y.282, B:T.310, B:I.315, B:W.337, B:Y.345 Hydrogen bonds: B:G.135, B:Y.137, B:K.166, B:D.242, B:D.242, B:N.339, B:D.344, B:N.372 Salt bridges: B:D.243, B:D.344

2 x CA: CALCIUM ION(Non-covalent)

CA.2: 4 residues within 4Å: Chain A: E.32, A.33, E.61, D.64 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.32, A:E.61, A:D.64, A:D.64 CA.4: 3 residues within 4Å: Chain B: E.32, E.61, D.64 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:E.32, B:E.61, B:D.64, B:D.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Macauley, M.S. et al., Inhibition of O-Glcnacase Using a Potent and Cell-Permeable Inhibitor Does not Induce Insulin Resistance in 3T3-L1 Adipocytes. Chem.Biol. (2010)

Release Date

2010-09-29

Peptides

O-GLCNACASE BT_4395: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

O-GLCNACASE BT_4395

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