- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-12-mer
- Ligands
- 12 x CO: COBALT (II) ION(Non-covalent)
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- 8 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)
CA.4: 1 residues within 4Å:- Chain B: E.106
3 PLIP interactions:2 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:E.106, B:E.106, H2O.5
CA.6: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)CA.10: 2 residues within 4Å:- Chain E: A.16, E.132
No protein-ligand interaction detected (PLIP)CA.12: 1 residues within 4Å:- Chain F: L.159
3 PLIP interactions:1 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: F:L.159, H2O.16, H2O.16
CA.13: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)CA.16: 1 residues within 4Å:- Chain H: N.101
No protein-ligand interaction detected (PLIP)CA.20: 1 residues within 4Å:- Chain I: N.101
No protein-ligand interaction detected (PLIP)CA.24: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)- 4 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
EPE.8: 9 residues within 4Å:- Chain C: R.46, G.47, I.50
- Chain E: R.46, G.47, I.50
- Chain L: R.46, G.47, I.50
No protein-ligand interaction detected (PLIP)EPE.17: 7 residues within 4Å:- Chain D: R.46, G.47
- Chain G: R.46, G.47, I.50
- Chain I: R.46, G.47
4 PLIP interactions:1 interactions with chain G, 1 interactions with chain I, 2 interactions with chain D- Water bridges: G:G.47, I:E.158, D:G.47, D:G.47
EPE.21: 5 residues within 4Å:- Chain B: G.47
- Chain F: R.46, G.47
- Chain J: R.46, G.47
5 PLIP interactions:2 interactions with chain J, 2 interactions with chain F, 1 interactions with chain B- Water bridges: J:G.47, J:G.47, F:R.46, F:G.47, B:R.46
EPE.25: 7 residues within 4Å:- Chain A: R.46, G.47
- Chain H: R.46, G.47
- Chain K: R.46, G.47, I.50
2 PLIP interactions:2 interactions with chain K- Water bridges: K:R.46, K:G.47
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Haikarainen, T. et al., Structural and Thermodynamic Characterization of Metal Ion Binding in Streptococcus Suis Dpr. J.Mol.Biol. (2011)
- Release Date
- 2010-11-24
- Peptides
- DNA PROTECTION DURING STARVATION PROTEIN: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
L
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-12-mer
- Ligands
- 12 x CO: COBALT (II) ION(Non-covalent)
- 3 x CL: CHLORIDE ION(Non-functional Binders)
- 8 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)
- 4 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Haikarainen, T. et al., Structural and Thermodynamic Characterization of Metal Ion Binding in Streptococcus Suis Dpr. J.Mol.Biol. (2011)
- Release Date
- 2010-11-24
- Peptides
- DNA PROTECTION DURING STARVATION PROTEIN: ABCDEFGHIJKL
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
HI
IJ
JK
KL
L