SMTL ID : 2y34.1

S-nitrosylated PHD2 (NO exposed) in complex with Fe(II) and UN9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.01 Å

Oligo State

monomer

Ligands

1 x FE2: FE (II) ION(Non-covalent)

FE2.1: 4 residues within 4Å: Chain A: H.139, D.141, H.200 Ligands: UN9.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.139, A:D.141, A:H.200, H2O.3

2 x UN9: N-[(1-CHLORO-4-HYDROXYISOQUINOLIN-3-YL)CARBONYL]GLYCINE(Non-covalent)

UN9.2: 15 residues within 4Å: Chain A: D.80, I.82, M.125, Y.129, Y.136, H.139, D.141, I.153, Y.155, L.169, H.200, V.202, R.209, W.215 Ligands: FE2.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.82 Hydrogen bonds: A:Y.155 Salt bridges: A:R.209 pi-Stacking: A:Y.136, A:Y.136 UN9.3: 5 residues within 4Å: Chain A: W.84, T.122, D.146, R.148, F.217 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.84, A:T.122 Hydrogen bonds: A:R.222 pi-Stacking: A:F.217

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chowdhury, R. et al., Studies on the reaction of nitric oxide with the hypoxia-inducible factor prolyl hydroxylase domain 2 (EGLN1). J. Mol. Biol. (2011)

Release Date

2010-12-29

Peptides

EGL NINE HOMOLOG 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

EGL NINE HOMOLOG 1

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