SMTL ID : 2zdz.1

X-ray structure of Bace-1 in complex with compound 3.b.10

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x 310: N-carbamimidoyl-2-[2-(2-chlorophenyl)-5-[4-(4-ethanoylphenoxy)phenyl]pyrrol-1-yl]ethanamide(Non-covalent)

310.1: 19 residues within 4Å: Chain A: G.27, Q.28, G.29, L.46, D.48, G.50, V.85, Y.87, W.92, F.124, I.126, W.131, I.134, R.144, D.244, S.245, G.246, T.247, T.248 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.46, A:V.85, A:F.124, A:I.126, A:W.131, A:R.144, A:T.248 Hydrogen bonds: A:G.50 Water bridges: A:Y.30, A:D.244, A:D.244 Salt bridges: A:D.48, A:D.244 pi-Stacking: A:Y.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cole, D.C. et al., Acylguanidine inhibitors of beta-secretase: optimization of the pyrrole ring substituents extending into the S1 and S3 substrate binding pockets. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-12-09

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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