SMTL ID : 3aid.1

A NEW CLASS OF HIV-1 PROTEASE INHIBITOR: THE CRYSTALLOGRAPHIC STRUCTURE, INHIBITION AND CHEMICAL SYNTHESIS OF AN AMINIMIDE PEPTIDE ISOSTERE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

1 x ARQ: BENZOYLAMINO-BENZYL-METHYL-[2-HYDROXY-3-[1-METHYL-ETHYL-OXY-N-FORMAMIDYL]-4-PHENYL-BUTYL]-AMMONIUM(Non-covalent)

ARQ.1: 18 residues within 4Å: Chain A: R.8, L.23, D.25, G.27, A.28, D.29, D.30, I.47, G.48, I.50, V.82 Chain B: R.8, L.23, D.25, G.27, G.48, G.49, I.50 14 PLIP interactions: 10 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:L.23, A:A.28, A:I.47, A:I.50, A:I.50, A:I.50, A:V.82, B:L.23 Hydrogen bonds: A:D.25, A:G.27, B:I.50 Salt bridges: A:D.25, B:D.25 Water bridges: B:G.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rutenber, E.E. et al., A new class of HIV-1 protease inhibitor: the crystallographic structure, inhibition and chemical synthesis of an aminimide peptide isostere. Bioorg.Med.Chem. (1996)

Release Date

1997-09-17

Peptides

HUMAN IMMUNODEFICIENCY VIRUS PROTEASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HUMAN IMMUNODEFICIENCY VIRUS PROTEASE

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