SMTL ID : 3i7e.1

Co-crystal structure of HIV-1 protease bound to a mutant resistant inhibitor UIC-98038

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

1 x DJR: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL [(1S,2R)-1-BENZYL-2-HYDROXY-3-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}PROPYL]CARBAMATE(Non-covalent)

DJR.1: 23 residues within 4Å: Chain A: D.25, G.27, A.28, D.29, D.30, G.48, G.49, I.50, V.82, I.84 Chain B: R.8, D.25, G.27, A.28, D.30, V.32, I.47, G.48, G.49, I.50, P.81, V.82, I.84 18 PLIP interactions: 9 interactions with chain B, 9 interactions with chain A Hydrophobic interactions: B:A.28, B:V.32, B:P.81, B:V.82, A:I.50, A:V.82, A:I.84 Hydrogen bonds: B:D.30, A:G.27, A:G.27, A:G.27, A:D.29, A:D.30 Water bridges: B:D.29, B:I.50, B:I.50 Salt bridges: B:D.25, A:D.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ghosh, A.K. et al., Design, Synthesis, Protein-Ligand X-ray Structure, and Biological Evaluation of a Series of Novel Macrocyclic Human Immunodeficiency Virus-1 Protease Inhibitors to Combat Drug Resistance. J.Med.Chem. (2009)

Release Date

2009-09-29

Peptides

HIV-1 protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

HIV-1 protease

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