SMTL ID : 3b45.1

Crystal structure of GlpG at 1.9A resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

17 x BNG: nonyl beta-D-glucopyranoside(Non-covalent)(Non-functional Binders)

BNG.1: 10 residues within 4Å: Chain A: E.1, R.2, A.3, W.67, W.69, Y.70, G.73, A.74 Ligands: BNG.2, BNG.6 Ligand excluded by PLIP BNG.2: 4 residues within 4Å: Chain A: Y.70, Q.136, L.139 Ligands: BNG.1 Ligand excluded by PLIP BNG.3: 5 residues within 4Å: Chain A: V.9, A.13 Ligands: BNG.5, BNG.14, BNG.15 Ligand excluded by PLIP BNG.4: 5 residues within 4Å: Chain A: V.6, M.10, T.88 Ligands: BNG.12, BNG.15 Ligand excluded by PLIP BNG.5: 6 residues within 4Å: Chain A: M.10, F.49, T.88, A.92 Ligands: BNG.3, BNG.15 Ligand excluded by PLIP BNG.6: 4 residues within 4Å: Chain A: F.63, F.142, I.145 Ligands: BNG.1 Ligand excluded by PLIP BNG.7: 8 residues within 4Å: Chain A: F.102, W.151, A.160, N.161, G.162, A.163, I.165 Ligands: BNG.10 Ligand excluded by PLIP BNG.8: 4 residues within 4Å: Chain A: I.147, V.148, W.151, F.152 Ligand excluded by PLIP BNG.9: 5 residues within 4Å: Chain A: M.118, G.119, W.122, E.126, L.168 Ligand excluded by PLIP BNG.10: 2 residues within 4Å: Chain A: A.166 Ligands: BNG.7 Ligand excluded by PLIP BNG.11: 1 residues within 4Å: Chain A: W.32 Ligand excluded by PLIP BNG.12: 1 residues within 4Å: Ligands: BNG.4 Ligand excluded by PLIP BNG.13: 2 residues within 4Å: Chain A: A.20, W.32 Ligand excluded by PLIP BNG.14: 2 residues within 4Å: Chain A: L.53 Ligands: BNG.3 Ligand excluded by PLIP BNG.15: 3 residues within 4Å: Ligands: BNG.3, BNG.4, BNG.5 Ligand excluded by PLIP BNG.16: 1 residues within 4Å: Chain A: W.151 Ligand excluded by PLIP BNG.17: 1 residues within 4Å: Chain A: I.19 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Y. et al., The role of L1 loop in the mechanism of rhomboid intramembrane protease GlpG. J.Mol.Biol. (2007)

Release Date

2008-01-22

Peptides

glpG: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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glpG

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