SMTL ID : 3c22.2 (3 other biounits)

Crystal structure of the carbohydrate recognition domain of human Langerin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: E.113, N.115, E.121, N.135, D.136 Ligands: MG.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.113, A:E.121, A:D.136, A:D.136, H2O.130

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 6 residues within 4Å: Chain A: E.113, N.115, E.121, N.135, D.136 Ligands: CA.1 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.113, A:D.136, A:D.136, H2O.129, H2O.130 MG.3: 4 residues within 4Å: Chain A: Y.36, S.38, L.39, I.40 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:Y.36, H2O.58

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thepaut, M. et al., Structural studies of langerin and Birbeck granule: a macromolecular organization model. Biochemistry (2009)

Release Date

2009-01-27

Peptides

C-type lectin domain family 4 member K: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C-type lectin domain family 4 member K

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