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SMTL ID : 3ca0.1

Sambucus nigra agglutinin II (SNA-II), hexagonal crystal form

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.95 Å
Oligo State
monomer
Ligands
1 x NAG- NAG- BMA- XYP- MAN- MAN- FUC: beta-D-xylopyranose-(1-2)-[alpha-D-mannopyranose-(1-3)][alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- FUC: alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- FUC- NAG: alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
7 x SO4: SULFATE ION(Non-functional Binders)
1 x ACT: ACETATE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Maveyraud, L. et al., Structural basis for sugar recognition, including the Tn carcinoma antigen, by the lectin SNA-II from Sambucus nigra. Proteins (2009)
Release Date
2008-11-25
Peptides
Agglutinin II: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

Agglutinin II

Related Entries With Identical Sequence

3c9z.1 | 3ca1.1 | 3ca3.1 | 3ca3.2 | 3ca3.3 | 3ca3.4 | 3ca3.5 | 3ca4.1 | 3ca5.1 | 3ca5.2 | 3ca5.3 | 3ca5.4 | 3ca6.1 | 3ca6.2 | 3ca6.3 | 3ca6.4 | 3cah.1 | 3cah.2 | 3cah.3