SMTL ID : 3ckv.1

Crystal Structure of a Mycobacterial Protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: V.113, P.114, R.116, R.320 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.116, A:R.320 SO4.5: 4 residues within 4Å: Chain B: V.113, P.114, R.116, R.320 2 PLIP interactions: 2 interactions with chain B Salt bridges: B:R.116, B:R.320

2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.2: 12 residues within 4Å: Chain A: P.55, A.56, L.57, E.59, S.86, G.118, K.119, D.139, S.140, D.141, Y.234, R.266 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:L.57, A:L.57, A:S.86, A:S.86, A:G.118, A:S.140, A:S.140, A:D.141 Salt bridges: A:R.266 UDP.6: 12 residues within 4Å: Chain B: P.55, A.56, L.57, E.59, S.86, G.118, K.119, D.139, S.140, D.141, Y.234, R.266 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:L.57, B:L.57, B:E.59, B:S.86, B:S.86, B:G.118, B:S.140, B:S.140, B:D.141 Salt bridges: B:R.266

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: G.189, R.190 Chain B: R.190 Ligands: GOL.4 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.190, A:R.190, B:R.190 GOL.4: 7 residues within 4Å: Chain A: G.189, R.190, V.191, T.192, L.214, L.271 Ligands: GOL.3 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.189, A:V.191, A:T.192, A:T.192, A:T.192 GOL.7: 4 residues within 4Å: Chain A: R.190 Chain B: G.189, R.190 Ligands: GOL.8 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:R.190, B:R.190, B:R.190 GOL.8: 7 residues within 4Å: Chain B: G.189, R.190, V.191, T.192, L.214, L.271 Ligands: GOL.7 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.189, B:V.191, B:T.192, B:T.192

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fulton, Z. et al., Crystal structure of a UDP-glucose-specific glycosyltransferase from a Mycobacterium species. J.Biol.Chem. (2008)

Release Date

2008-07-29

Peptides

Putative uncharacterized protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Putative uncharacterized protein

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