SMTL ID : 3cs7.1

FACTOR XA IN COMPLEX WITH THE INHIBITOR 1-(4-methoxyphenyl)-6-(4-(1-(pyrrolidin-1-ylmethyl)cyclopropyl)phenyl)-3-(trifluoromethyl)-5,6-dihydro-1H-pyrazolo[3,4-c]pyridin-7(4H)-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.56, N.58, Q.61, E.63, E.66 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.56, A:N.58, A:Q.61, A:E.66, H2O.1

1 x LG0: 1-(4-methoxyphenyl)-6-(4-(1-(pyrrolidin-1-ylmethyl)cyclopropyl)phenyl)-3-(trifluoromethyl)-5,6-dihydro-1H-pyrazolo[3,4-c]pyridin-7(4H)-one(Non-covalent)

LG0.2: 20 residues within 4Å: Chain A: K.82, E.83, T.84, Y.85, R.132, E.135, F.162, D.179, A.180, C.181, Q.182, S.185, V.203, W.205, G.206, G.208, C.209, G.216, I.217, Y.218 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.85, A:F.162, A:F.162, A:V.203, A:W.205, A:W.205, A:W.205 Hydrogen bonds: A:Q.182, A:G.206 pi-Stacking: A:Y.85

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Qiao, J.X. et al., Achieving structural diversity using the perpendicular conformation of alpha-substituted phenylcyclopropanes to mimic the bioactive conformation of ortho-substituted biphenyl P4 moieties: discovery of novel, highly potent inhibitors of Factor Xa. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-07-08

Peptides

Coagulation factor X: A
Coagulation factor X: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
L

Coagulation factor X

Coagulation factor X

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