SMTL ID : 3d4c.1

ZP-N domain of mammalian sperm receptor ZP3 (crystal form I)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 14 residues within 4Å: Chain A: N.13, D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, W.341 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.66, A:R.67, A:Y.156

7 x CD: CADMIUM ION(Non-covalent)

CD.2: 2 residues within 4Å: Chain A: H.426, E.427 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.426, A:E.427 CD.3: 3 residues within 4Å: Chain A: K.138, N.202, H.204 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.204 CD.4: 1 residues within 4Å: Chain A: E.380 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.380, A:E.380 CD.5: 1 residues within 4Å: Chain A: E.464 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.464, A:E.464 CD.6: 1 residues within 4Å: Chain A: H.40 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.40, A:H.40 CD.7: 1 residues within 4Å: Chain A: E.39 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:E.39, A:E.39 CD.8: 3 residues within 4Å: Chain A: D.210, S.212, D.437 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.210, A:D.437

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Monne, M. et al., Crystal structure of the ZP-N domain of ZP3 reveals the core fold of animal egg coats. Nature (2008)

Release Date

2008-12-02

Peptides

Maltose-binding periplasmic protein, LINKER, Zona pellucida protein 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Maltose-binding periplasmic protein, LINKER, Zona pellucida protein 3

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