SMTL ID : 3ddo.1

X-RAY Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with by Phosphate Ion at 1.5A Resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-hexamer

Ligands

5 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: G.26, R.30, R.91, I.92, G.93, T.94 Chain F: R.48 9 PLIP interactions: 8 interactions with chain A, 1 interactions with chain F Hydrogen bonds: A:G.26, A:T.94, A:T.94 Water bridges: A:D.27, A:R.30, A:T.94 Salt bridges: A:R.30, A:R.91, F:R.48 PO4.2: 7 residues within 4Å: Chain B: G.26, R.30, R.91, I.92, G.93, T.94 Chain D: R.48 9 PLIP interactions: 7 interactions with chain B, 2 interactions with chain D Hydrogen bonds: B:G.26, B:I.92, B:T.94, B:T.94 Water bridges: B:R.30, D:R.48 Salt bridges: B:R.30, B:R.91, D:R.48 PO4.3: 9 residues within 4Å: Chain C: P.25, G.26, R.30, R.91, I.92, G.93, T.94, E.198 Chain E: R.48 12 PLIP interactions: 11 interactions with chain C, 1 interactions with chain E Hydrogen bonds: C:G.26, C:I.92, C:T.94 Water bridges: C:D.27, C:D.27, C:E.198, C:E.198, C:E.198, C:E.198 Salt bridges: C:R.30, C:R.91, E:R.48 PO4.4: 8 residues within 4Å: Chain B: R.48 Chain D: G.26, R.30, R.91, I.92, G.93, T.94, E.198 7 PLIP interactions: 6 interactions with chain D, 1 interactions with chain B Hydrogen bonds: D:G.26, D:T.94, D:T.94, D:T.94 Salt bridges: D:R.30, D:R.91, B:R.48 PO4.5: 7 residues within 4Å: Chain A: R.48 Chain F: G.26, R.91, I.92, G.93, T.94, E.198 6 PLIP interactions: 5 interactions with chain F, 1 interactions with chain A Hydrogen bonds: F:G.26, F:T.94, F:T.94 Water bridges: F:D.27 Salt bridges: F:R.91, A:R.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lashkov, A.A. et al., X-RAY Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with by Phosphate Ion at 1.5A Resolution. To be Published

Release Date

2009-06-09

Peptides

Uridine phosphorylase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Uridine phosphorylase

Related Entries With Identical Sequence