SMTL ID : 3e93.1

Crystal Structure of P38 Kinase in Complex with A Biaryl Amide Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x 19B: 4-methyl-N-(3-morpholin-4-ylphenyl)-3-(3-piperidin-4-yl-1,2-benzisoxazol-6-yl)benzamide(Non-covalent)

19B.1: 21 residues within 4Å: Chain A: V.41, V.49, A.62, K.64, E.82, L.85, L.86, V.94, I.95, L.115, T.117, H.118, L.119, M.120, I.152, I.157, H.159, I.177, L.178, D.179, F.180 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:V.49, A:K.64, A:E.82, A:L.85, A:L.86, A:T.117, A:L.119, A:D.179, A:F.180 Hydrogen bonds: A:V.41, A:E.82, A:E.82, A:M.120, A:D.179 Water bridges: A:K.64 pi-Stacking: A:F.180 pi-Cation interactions: A:K.64

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: D.136, H.137, F.140, Y.322 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.136, A:Y.322 Water bridges: A:H.137, A:D.172 GOL.3: 5 residues within 4Å: Chain A: A.320, Q.321, Y.322, H.323, D.324 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.320, A:Y.322 GOL.4: 2 residues within 4Å: Chain A: R.231, T.232 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.232 Water bridges: A:G.230, A:T.232

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baldwin, I. et al., Kinase array design, back to front: Biaryl amides. Bioorg.Med.Chem.Lett. (2008)

Release Date

2008-09-30

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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