SMTL ID : 3o43.1

Complex of an alpha/beta-peptide based on the gp41 CHR domain bound to gp41-5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: L.117, S.118, S.121, W.124, R.196 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.118, A:S.121, A:R.196 GOL.2: 6 residues within 4Å: Chain A: G.123, E.126, W.127, E.130, L.185, W.188 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.126, A:W.127 GOL.3: 5 residues within 4Å: Chain A: E.72, Q.73, E.74, L.75, L.76 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.75 GOL.4: 6 residues within 4Å: Chain A: K.191, Q.194 Chain B: W.4, E.5, W.7, D.8 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:D.8, A:Q.194, A:Q.194

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Johnson, L.M. et al., Broad Distribution of Energetically Important Contacts across an Extended Protein Interface. J.Am.Chem.Soc. (2011)

Release Date

2011-07-27

Peptides

gp41-5: A
alpha/beta-peptide derived from gp41 CHR domain sequence: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

gp41-5

alpha/beta-peptide derived from gp41 CHR domain sequence

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