- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- monomer
- Ligands
- 1 x FE2: FE (II) ION(Non-covalent)
- 3 x CA: CALCIUM ION(Non-covalent)
- 8 x ACY: ACETIC ACID(Non-functional Binders)
ACY.4: 5 residues within 4Å:- Chain A: F.235, Q.238, F.239, E.378, N.589
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:F.235, A:Q.238
- Hydrogen bonds: A:N.589
- Salt bridges: A:H.583
ACY.5: 6 residues within 4Å:- Chain A: H.164, F.173, S.178, Y.181, Q.182, I.429
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:F.173, A:Y.181, A:I.429
- Hydrogen bonds: A:Q.182
- Water bridges: A:S.178
- Salt bridges: A:H.164
ACY.6: 5 residues within 4Å:- Chain A: S.444, Y.584, A.592, A.623, V.627
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:V.627
- Water bridges: A:A.592
ACY.7: 4 residues within 4Å:- Chain A: N.266, A.267, L.269
- Ligands: GOL.12
No protein-ligand interaction detected (PLIP)ACY.8: 4 residues within 4Å:- Chain A: F.633, Y.639, E.688, R.689
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:F.633, A:Y.639
- Hydrogen bonds: A:E.688
- Salt bridges: A:R.689
ACY.9: 2 residues within 4Å:- Chain A: L.254, S.256
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:L.254
- Hydrogen bonds: A:L.254
ACY.10: 4 residues within 4Å:- Chain A: L.336, G.337, P.486, G.487
1 PLIP interactions:1 interactions with chain A- Water bridges: A:Y.489
ACY.11: 7 residues within 4Å:- Chain A: L.192, G.195, S.196, T.199, L.213, S.618, A.621
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.199
- 10 x GOL: GLYCEROL(Non-functional Binders)
GOL.12: 7 residues within 4Å:- Chain A: N.266, L.269, D.270, R.271, G.272, K.273
- Ligands: ACY.7
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.266, A:N.266, A:G.272
GOL.13: 6 residues within 4Å:- Chain A: G.506, I.509, A.510, R.555, E.556, K.559
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.556, A:K.559, A:K.559
GOL.14: 9 residues within 4Å:- Chain A: T.23, D.24, A.25, T.26, I.27, L.43, D.44, G.46, F.48
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:T.23, A:I.27, A:I.27, A:D.44
- Water bridges: A:F.48
GOL.15: 6 residues within 4Å:- Chain A: V.291, F.381, N.385, R.390, C.459, E.462
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:N.385, A:R.390, A:C.459
- Water bridges: A:R.390, A:R.390
GOL.16: 5 residues within 4Å:- Chain A: E.202, N.203, D.205, S.206, D.209
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:E.202, A:N.203, A:D.205, A:D.205, A:D.209
GOL.17: 9 residues within 4Å:- Chain A: G.16, D.17, R.18, F.86, N.88, F.106, R.638, S.644, A.645
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:D.17, A:D.17, A:R.18, A:N.88, A:S.644
- Water bridges: A:E.14, A:R.18, A:R.638
GOL.18: 6 residues within 4Å:- Chain A: D.492, D.493, I.667, K.670, I.671, R.674
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.492, A:I.667, A:R.674
GOL.19: 5 residues within 4Å:- Chain A: Y.207, D.208, W.229, H.230, M.368
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.208
- Water bridges: A:Y.207, A:Y.207, A:E.364
GOL.20: 2 residues within 4Å:- Chain A: D.662, E.665
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.662, A:E.665
- Water bridges: A:D.662, A:D.662
GOL.21: 8 residues within 4Å:- Chain A: V.246, D.467, Y.468, H.469, L.470, A.473, Y.490, Q.572
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Q.572
- Water bridges: A:R.390, A:Y.468
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Neau, D.B. et al., The 1.85 A structure of an 8R-lipoxygenase suggests a general model for lipoxygenase product specificity. Biochemistry (2009)
- Release Date
- 2009-08-18
- Peptides
- Allene oxide synthase-lipoxygenase protein: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.85 Å
- Oligo State
- monomer
- Ligands
- 1 x FE2: FE (II) ION(Non-covalent)
- 3 x CA: CALCIUM ION(Non-covalent)
- 8 x ACY: ACETIC ACID(Non-functional Binders)
- 10 x GOL: GLYCEROL(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Neau, D.B. et al., The 1.85 A structure of an 8R-lipoxygenase suggests a general model for lipoxygenase product specificity. Biochemistry (2009)
- Release Date
- 2009-08-18
- Peptides
- Allene oxide synthase-lipoxygenase protein: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A