SMTL ID : 3gan.2 (1 other biounit)

Crystal structure of gene product from Arabidopsis thaliana At3g22680 with bound suramin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

4 x SVR: 8,8'-[CARBONYLBIS[IMINO-3,1-PHENYLENECARBONYLIMINO(4-METHYL-3,1-PHENYLENE)CARBONYLIMINO]]BIS-1,3,5-NAPHTHALENETRISULFON IC ACID(Non-covalent)

SVR.1: 15 residues within 4Å: Chain A: R.41, Y.48, Q.51, V.52, P.53, G.79, Q.80, P.81, W.140, Y.146, I.150, D.151, P.152, I.153, P.155 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Y.48, A:Y.48, A:P.53, A:P.81, A:W.140, A:Y.146, A:I.150, A:I.150, A:P.155 Hydrogen bonds: A:Y.48, A:Y.48, A:P.152, A:P.152 Water bridges: A:Q.80 Salt bridges: A:R.41 SVR.2: 1 residues within 4Å: Chain A: F.154 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.154, A:F.154, A:F.154 pi-Stacking: A:F.154 SVR.4: 15 residues within 4Å: Chain B: R.41, Y.48, Q.51, V.52, P.53, G.79, Q.80, P.81, W.140, Y.146, I.150, D.151, P.152, I.153, P.155 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:Y.48, B:Y.48, B:P.53, B:P.81, B:W.140, B:Y.146, B:I.150, B:I.150, B:P.155 Hydrogen bonds: B:Y.48, B:Y.48, B:P.152, B:P.152 Water bridges: B:Q.80 Salt bridges: B:R.41 SVR.5: 1 residues within 4Å: Chain B: F.154 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:F.154, B:F.154, B:F.154 pi-Stacking: B:F.154

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 5 residues within 4Å: Chain A: F.64, T.65, S.66, G.69, L.70 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain B: F.64, T.65, S.66, G.69, L.70 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burgie, E.S. et al., Crystal structure of gene product from Arabidopsis thaliana At3g22680 with bound suramin. To be Published

Release Date

2009-03-03

Peptides

Uncharacterized protein At3g22680: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Uncharacterized protein At3g22680

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