SMTL ID : 3gxt.1

Crystal structure of alpha-galactosidase A at pH 4.5 complexed with 1-deoxygalactonijirimycin

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.70 Å
Oligo State
homo-dimer
Ligands
3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose(Non-functional Binders)
1 x NAG- NAG- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)
1 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-functional Binders)
5 x SO4: SULFATE ION(Non-functional Binders)
2 x NOJ: 1-DEOXYNOJIRIMYCIN(Non-covalent)
1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Lieberman, R.L. et al., Effects of pH and iminosugar pharmacological chaperones on lysosomal glycosidase structure and stability. Biochemistry (2009)
Release Date
2009-05-26
Peptides
Alpha-galactosidase A: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

Alpha-galactosidase A

Related Entries With Identical Sequence

1r46.1 | 1r47.1 | 3gxn.1 | 3gxp.1 | 3hg2.1 | 3hg4.1 | 3hg5.1 | 3s5y.1 | 3s5z.1 | 4nxs.1 | 6ibk.1 | 6ibm.1 | 6ibr.1 | 6ibt.1