SMTL ID : 8k7f.1

Crystal structure of human lysosomal alpha-galactosidase A in complex with (2R,3S,4R,5R)-2,5-bis(hydroxymethyl)pyrrolidine-3,4-diol

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.98 Å
Oligo State
homo-dimer
Ligands
2 x NAG- NAG- BMA- MAN: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x VMF: (2~{R},3~{R},4~{S},5~{R})-2,5-bis(hydroxymethyl)pyrrolidine-3,4-diol(Non-covalent)
2 x SO4: SULFATE ION(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Li, H.Y. et al., Mechanistic Insights into Dibasic Iminosugars as pH-Selective Pharmacological Chaperones to Stabilize Human alpha-Galactosidase. Jacs Au (2024)
Release Date
2024-04-10
Peptides
Alpha-galactosidase A: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

Alpha-galactosidase A

Related Entries With Identical Sequence

1r46.1 | 1r47.1 | 3gxn.1 | 3gxp.1 | 3gxt.1 | 3hg2.1 | 3hg4.1 | 3hg5.1 | 3s5y.1 | 3s5z.1 | 4nxs.1 | 6ibk.1 | 6ibm.1 | 6ibr.1 | 6ibt.1 | 8k7d.1 | 8k7e.1 | 8k7g.1 | 8k7h.1 | 8k7i.1 | 8k7j.1 | 8k7k.1 | 8k7l.1