SMTL ID : 3i25.1 (2 other biounits)

Potent Beta-Secretase 1 hydroxyethylene Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x MV7: N-[(2S,3S,5R)-1-(3,5-difluorophenoxy)-3-hydroxy-5-(2-methoxyethoxy)-6-[[(2S)-3-methyl-1-oxo-1-(phenylmethylamino)butan-2-yl]amino]-6-oxo-hexan-2-yl]-5-(methyl-methylsulfonyl-amino)-N'-[(1R)-1-phenylethyl]benzene-1,3-dicarboxamide(Non-covalent)

MV7.1: 33 residues within 4Å: Chain A: G.32, Q.33, G.34, L.51, D.53, G.55, S.56, V.90, P.91, Y.92, T.93, Q.94, G.95, K.128, F.129, I.131, W.136, I.139, I.147, Y.219, K.245, I.247, D.249, S.250, G.251, T.252, T.253, N.254, R.256, S.346, T.350, V.353, A.356 28 PLIP interactions: 28 interactions with chain A Hydrophobic interactions: A:L.51, A:L.51, A:V.90, A:P.91, A:Y.92, A:Q.94, A:I.131, A:I.147, A:Y.219, A:T.253, A:A.356 Hydrogen bonds: A:D.53, A:G.55, A:P.91, A:T.93, A:Q.94, A:Q.94, A:Y.219, A:D.249, A:G.251, A:G.251, A:T.252, A:T.253, A:N.254, A:S.346 Water bridges: A:T.93, A:T.253 pi-Stacking: A:F.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bjorklund, C. et al., Discovery of potent BACE-1 inhibitors containing a new hydroxyethylene (HE) scaffold: exploration of P1' alkoxy residues and an aminoethylene (AE) central core. Bioorg.Med.Chem. (2010)

Release Date

2010-06-02

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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