SMTL ID : 3iq7.1

Crystal Structure of human Haspin in complex with 5-Iodotubercidin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 5 residues within 4Å: Chain A: F.54, D.208, H.210, D.246, T.248 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:D.246 Water bridges: A:V.53, A:D.246, A:D.246, A:D.246, A:D.246 Salt bridges: A:H.210

1 x 5ID: (2R,3R,4S,5R)-2-(4-AMINO-5-IODO-7H-PYRROLO[2,3-D]PYRIMIDIN-7-YL)-5-(HYDROXYMETHYL)TETRAHYDROFURAN-3,4-DIOL(Non-covalent)

5ID.2: 18 residues within 4Å: Chain A: I.49, G.50, E.51, F.54, V.57, A.68, I.116, F.164, E.165, F.166, G.167, G.168, D.170, Q.173, G.212, L.215, I.245 Ligands: IOD.3 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:A.68, A:L.215 Hydrogen bonds: A:E.165, A:G.167, A:Q.173 Water bridges: A:D.170

1 x IOD: IODIDE ION(Non-functional Binders)

IOD.3: 3 residues within 4Å: Chain A: K.70, D.246 Ligands: 5ID.2 Ligand excluded by PLIP

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 7 residues within 4Å: Chain A: T.112, G.114, Q.190, A.193, S.194, Y.226, Q.241 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.112, A:Q.190, A:Q.241 Water bridges: A:T.112, A:E.113 EDO.5: 4 residues within 4Å: Chain A: A.62, V.67, N.119, E.163 2 PLIP interactions: 2 interactions with chain A Water bridges: A:N.119, A:N.119

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Eswaran, J. et al., Structure and functional characterization of the atypical human kinase haspin. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-09-08

Peptides

Serine/threonine-protein kinase haspin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase haspin

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