SMTL ID : 3ixp.1

Crystal structure of the ecdysone receptor bound to BYI08346

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

hetero-2-2-mer

Ligands

2 x EPH: L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE(Non-covalent)

EPH.1: 24 residues within 4Å: Chain A: L.27, V.35, P.36, F.39, V.43, L.46, C.47, L.87, L.88, I.91, L.128, S.132, Q.135, A.136, G.137, V.138, I.141, S.228, H.231, L.232, F.235, L.237 Chain C: P.124, G.125 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.27, A:F.39, A:V.43, A:L.46, A:L.87, A:I.91, A:L.128, A:L.128, A:V.138, A:I.141, A:H.231, A:F.235, A:L.237 Water bridges: A:Q.135 EPH.3: 24 residues within 4Å: Chain A: P.124, G.125 Chain C: L.27, V.35, P.36, F.39, V.43, L.46, C.47, L.87, L.88, I.91, L.128, S.132, Q.135, A.136, G.137, V.138, I.141, S.228, H.231, L.232, F.235, L.237 14 PLIP interactions: 14 interactions with chain C Hydrophobic interactions: C:L.27, C:F.39, C:V.43, C:L.46, C:L.87, C:I.91, C:L.128, C:L.128, C:V.138, C:I.141, C:H.231, C:F.235, C:L.237 Water bridges: C:Q.135

2 x 834: N-[2-(2-chlorophenyl)-4-methyl-5-(1-methylethyl)-1H-imidazol-1-yl]-5-methyl-2,3-dihydro-1,4-benzodioxine-6-carboxamide(Non-covalent)

834.2: 18 residues within 4Å: Chain B: F.69, I.72, T.73, T.76, M.113, M.114, V.117, Y.136, Y.141, M.146, V.149, D.152, L.153, Q.236, N.237, M.240, L.255, W.259 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:F.69, B:T.73, B:M.113, B:V.117, B:V.149, B:V.149, B:L.153, B:L.255, B:W.259 Hydrogen bonds: B:N.237 pi-Stacking: B:Y.136, B:W.259 834.4: 18 residues within 4Å: Chain D: F.69, I.72, T.73, T.76, M.113, M.114, V.117, Y.136, Y.141, M.146, V.149, D.152, L.153, Q.236, N.237, M.240, L.255, W.259 14 PLIP interactions: 14 interactions with chain D Hydrophobic interactions: D:F.69, D:T.73, D:M.113, D:V.117, D:V.149, D:V.149, D:L.153, D:L.255, D:W.259 Hydrogen bonds: D:T.76, D:Y.141, D:N.237 pi-Stacking: D:Y.136, D:W.259

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moras, D. et al., Adaptability of the ecdysone receptor bound to synthetic ligands. To be Published

Release Date

2010-12-15

Peptides

Gene regulation protein: AC
Ecdysone receptor: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
D

D
D

Gene regulation protein

Ecdysone receptor

Related Entries With Identical Sequence